Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015844362.1_cds_XP_016509006.1_21971
CDS Infomation

[gene=LOC107826531] [db_xref=GeneID:107826531] [protein=scarecrow-like protein 30] [protein_id=XP_016509006.1] [location=10915..13026] [gbkey=CDS]
Sequence

ATGAATACTAATACCTATTTTCCATCAGTTGATCATAGATCAACAGATGGACTTGAATGT
TGTCATCGTTTCGCTATGGCCAGTACTAATCTTGGCAATGAATTTAGCAGTACTGATATT
CATGATGTTGTGTTCTTTTCATCGAGTAACGGAACATCATCTAATAATGACGAGGTTGTT
GTTGAGGGTGGTGGTGGTGGTGGTTGTGATCAAACAGTAGTCGAAAGCGACTACTTTGAT
GGAGTGTTTAAGTATATACAACAGATGCTTCTAGAAGAAGAAGATGATTTAGAAAGTAGA
CCTTGCATGTTTCAAGATTGTATTGCTCTTCAGGCTGCTGAGAAATCTTTTTATGATGCC
CTCACTGACAACAACAACAACGACGACGATCCAACAATCGTCGAGCACTGTTCTAGTACT
GATTTTCCAGTTAATCATGGTTTTATTAGTACTACTCATTGTCTGCAAGACGACAACTTC
AATCACTTTCTTGATCAGTCCGACTTGATTTCTGATTTCGATTGTTCAAATACTGGAATA
CGTGGAAACACTCCTTTGAACAATAATTGTCAAGTTGTTGCTGCTGCTAATGATGATCAT
AGGAATATTTATTATGGTGTAAACTCCACAAATACGAACAATCAAGGGGGAACATCAAAG
TCAGAGGGGAAAAAGAAGCACAATCGAGAGGACTGTGGCGAATCATCAAATGGTCCTAAC
AGCAAGCAGTTTGCGAGTAATGGTGCAGAGGAAACAGAAGAGAAAACTCATGAGGAGTAC
TACGATAAGGCAGTTCTTTGTCCAGATATGAATCCTGCCTTTTACGTCGAGGATTCGTGT
GATGACGGATCAAGATCATCATCAGAAAATGCAGCATGGGACAAGCAAAAAAGCCGTCAT
ATAAAGCAGTCTAAAAGAGGAAGGCCGCGTGGAACCAAAAAGGGTGTAAAGACTAATGAA
GTAGTAGACCTTACCAGTCTCCTAACACGATGCGCGGAAGCAGCAGCTAGCTATAACAGC
AAAACTTTTGTAGAGGTTCTTAGCAAAATCAGGCAACACTCGTCTCCCTTTGGTGATCCT
ACTGCTAGATTGGCCTATTGTTTTGCCAATGCCCTCGAAGCTCGGTTTGCTGGTGGTGGT
GGTGTAGACACAATTACTACTCCAAAAAAATCAATATTATCAGCTGCAGATTTCTTAAAA
GCATATCAGGTATACATCACAGCTTGTCCATTCAAGAGAATGTCAAACATATTTGCTAAC
AAGTCTATCGCGAAATTAACAAGTGAAGCTCCAAAGGTTCACATAATAGATTTCGGGATA
CTATATGGATTTCAATGGCCTTGTATAATACATGGAATCTCCCTTAGGCCAGGTGGACCA
CCAAAGCTTAAGATCACAGGAATTGATTTCCCTCAACCAGGTTTTCGACCAGCTGAAAGA
GTCGAGGAGACAGGACGTCGATTGGAGAATTATTGCAAGAGATTCGGTGTTCCATTTGAA
TATAAAGCAATAGCAAAGAAATGGGATGATATTAAACTAGAACATCTGAATATTGAGCAA
GATGAAACTGTGGTTGTCAATTGTTTGTACAGGCTAAAGAATGTACCCGATGAAACAGTA
CTAACTAATGGCAACAACAACCCGAGAAATGCTGTTCTGAGATTGATCAAGGAAATAAAT
CCACATTGGTTCGTTCATGGGATCGTGAACGCTATGTACAATGCATCTTTCTTCACTACA
AGATTTCGAGAGGCTTTATTTCATTTCTCGTCTCAGTTTGACATGTTCGAAGCTACAATG
ACACGAGAAGATGAAGGTAGGATGATATTCGAGCAGGAAGTATTCGGAAGAGATATAATG
AACGTTATAGCCTGTGAAGGGACGGAGAGAGTTGAGAGGCCGGAGAGTTACAAGCAATGG
TCAGTGAGGAATCAGATAGCGGGGTTCAGGCAACTTCCGTTGAATCAAGACATTGTCAAG
GAAGTCAAGGCCAAGGTGAGAATGTTTTATCACAGGGATTTTCTAGTGGATGAAGATAGT
AACTGGATGTTGCAAGGTTGGAAAGGAAGAATCATGTATGCACTATCTGTTTGGCAGCCT
ATACATAAATAA

Peptide Sequence

PEP ID

XP_016509006.1
PEP Infomation

PREDICTED: scarecrow-like protein 30 [Nicotiana tabacum]
Sequence

MNTNTYFPSVDHRSTDGLECCHRFAMASTNLGNEFSSTDIHDVVFFSSSNGTSSNNDEVV
VEGGGGGGCDQTVVESDYFDGVFKYIQQMLLEEEDDLESRPCMFQDCIALQAAEKSFYDA
LTDNNNNDDDPTIVEHCSSTDFPVNHGFISTTHCLQDDNFNHFLDQSDLISDFDCSNTGI
RGNTPLNNNCQVVAAANDDHRNIYYGVNSTNTNNQGGTSKSEGKKKHNREDCGESSNGPN
SKQFASNGAEETEEKTHEEYYDKAVLCPDMNPAFYVEDSCDDGSRSSSENAAWDKQKSRH
IKQSKRGRPRGTKKGVKTNEVVDLTSLLTRCAEAAASYNSKTFVEVLSKIRQHSSPFGDP
TARLAYCFANALEARFAGGGGVDTITTPKKSILSAADFLKAYQVYITACPFKRMSNIFAN
KSIAKLTSEAPKVHIIDFGILYGFQWPCIIHGISLRPGGPPKLKITGIDFPQPGFRPAER
VEETGRRLENYCKRFGVPFEYKAIAKKWDDIKLEHLNIEQDETVVVNCLYRLKNVPDETV
LTNGNNNPRNAVLRLIKEINPHWFVHGIVNAMYNASFFTTRFREALFHFSSQFDMFEATM
TREDEGRMIFEQEVFGRDIMNVIACEGTERVERPESYKQWSVRNQIAGFRQLPLNQDIVK
EVKAKVRMFYHRDFLVDEDSNWMLQGWKGRIMYALSVWQPIHK

Transcript Sequence

Gene sequence data has not been registered.